Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
SspnQ62147 Gm28760-201ENSMUST00000185995 736 ntBASIC11.01□□□□□ -0.65
SspnQ62147 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.01□□□□□ -0.65
SspnQ62147 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.01□□□□□ -0.65
SspnQ62147 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SspnQ62147 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
SspnQ62147 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SspnQ62147 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SspnQ62147 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SspnQ62147 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SspnQ62147 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.01□□□□□ -0.65
SspnQ62147 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SspnQ62147 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SspnQ62147 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SspnQ62147 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SspnQ62147 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SspnQ62147 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SspnQ62147 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SspnQ62147 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SspnQ62147 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SspnQ62147 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SspnQ62147 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SspnQ62147 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SspnQ62147 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SspnQ62147 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11□□□□□ -0.65
SspnQ62147 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11□□□□□ -0.65
SspnQ62147 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SspnQ62147 Gm37057-201ENSMUST00000192624 1916 ntBASIC11□□□□□ -0.65
SspnQ62147 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11□□□□□ -0.65
SspnQ62147 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SspnQ62147 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11□□□□□ -0.65
SspnQ62147 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11□□□□□ -0.65
SspnQ62147 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Gm13886-201ENSMUST00000117876 1183 ntBASIC11□□□□□ -0.65
SspnQ62147 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
SspnQ62147 Gm15920-201ENSMUST00000118998 402 ntBASIC11□□□□□ -0.65
SspnQ62147 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11□□□□□ -0.65
SspnQ62147 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11□□□□□ -0.65
SspnQ62147 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
SspnQ62147 Gm21854-201ENSMUST00000179901 471 ntBASIC11□□□□□ -0.65
SspnQ62147 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11□□□□□ -0.65
SspnQ62147 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11□□□□□ -0.65
SspnQ62147 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11□□□□□ -0.65
SspnQ62147 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11□□□□□ -0.65
SspnQ62147 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SspnQ62147 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SspnQ62147 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SspnQ62147 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
SspnQ62147 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SspnQ62147 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.99□□□□□ -0.65
SspnQ62147 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
SspnQ62147 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
SspnQ62147 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Gm14057-201ENSMUST00000120631 482 ntBASIC10.99□□□□□ -0.65
SspnQ62147 Gm14719-201ENSMUST00000121891 340 ntBASIC10.99□□□□□ -0.65
SspnQ62147 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.99□□□□□ -0.65
SspnQ62147 Mir7023-201ENSMUST00000185093 64 ntBASIC10.99□□□□□ -0.65
SspnQ62147 Gm43094-201ENSMUST00000196549 921 ntBASIC10.99□□□□□ -0.65
SspnQ62147 Gm5279-201ENSMUST00000199575 745 ntBASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms