Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gm3017-201ENSMUST00000203603 1126 ntBASIC17.17■□□□□ 0.34
Gli3Q61602 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC17.17■□□□□ 0.34
Gli3Q61602 AC124433.1-201ENSMUST00000224483 1063 ntBASIC17.17■□□□□ 0.34
Gli3Q61602 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC17.17■□□□□ 0.34
Gli3Q61602 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gli3Q61602 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gli3Q61602 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gli3Q61602 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
Gli3Q61602 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Gli3Q61602 Gm6170-201ENSMUST00000187672 1388 ntBASIC17.17■□□□□ 0.34
Gli3Q61602 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gli3Q61602 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Gli3Q61602 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gli3Q61602 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gli3Q61602 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gli3Q61602 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Gli3Q61602 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gli3Q61602 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Gli3Q61602 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Gli3Q61602 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC17.16■□□□□ 0.34
Gli3Q61602 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC17.16■□□□□ 0.34
Gli3Q61602 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
Gli3Q61602 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gli3Q61602 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Gli3Q61602 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC17.16■□□□□ 0.34
Gli3Q61602 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Gli3Q61602 AC158388.3-202ENSMUST00000225517 775 ntBASIC17.16■□□□□ 0.34
Gli3Q61602 CT573086.4-201ENSMUST00000226729 342 ntBASIC17.16■□□□□ 0.34
Gli3Q61602 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gli3Q61602 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gli3Q61602 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Gli3Q61602 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gli3Q61602 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gli3Q61602 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gli3Q61602 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Gli3Q61602 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gli3Q61602 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gli3Q61602 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gli3Q61602 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gli3Q61602 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gli3Q61602 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gli3Q61602 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gli3Q61602 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.16■□□□□ 0.34
Gli3Q61602 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gli3Q61602 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gli3Q61602 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gli3Q61602 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gli3Q61602 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Gli3Q61602 Gm8731-201ENSMUST00000118088 412 ntBASIC17.15■□□□□ 0.34
Gli3Q61602 Gm15003-201ENSMUST00000118884 446 ntBASIC17.15■□□□□ 0.34
Gli3Q61602 Mir6407-201ENSMUST00000184510 101 ntBASIC17.15■□□□□ 0.34
Gli3Q61602 Gm42433-201ENSMUST00000196806 940 ntBASIC17.15■□□□□ 0.34
Gli3Q61602 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gli3Q61602 Gm18499-201ENSMUST00000220808 1021 ntBASIC17.15■□□□□ 0.34
Gli3Q61602 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gli3Q61602 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gli3Q61602 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Gli3Q61602 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gli3Q61602 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gli3Q61602 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gli3Q61602 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gli3Q61602 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gli3Q61602 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gli3Q61602 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gli3Q61602 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gli3Q61602 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gli3Q61602 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gli3Q61602 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gli3Q61602 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gli3Q61602 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gli3Q61602 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.15■□□□□ 0.34
Gli3Q61602 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gli3Q61602 Gm24934-201ENSMUST00000103764 111 ntBASIC17.15■□□□□ 0.34
Gli3Q61602 Gm22711-201ENSMUST00000116890 133 ntBASIC17.15■□□□□ 0.34
Gli3Q61602 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gli3Q61602 Gm12856-201ENSMUST00000119471 1293 ntBASIC17.15■□□□□ 0.34
Gli3Q61602 Gm13328-201ENSMUST00000120816 1020 ntBASIC17.15■□□□□ 0.34
Gli3Q61602 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gli3Q61602 Gm44421-201ENSMUST00000205064 1221 ntBASIC17.15■□□□□ 0.34
Gli3Q61602 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gli3Q61602 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gli3Q61602 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gli3Q61602 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gli3Q61602 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gli3Q61602 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
Gli3Q61602 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gli3Q61602 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gli3Q61602 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Gli3Q61602 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gli3Q61602 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gli3Q61602 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gli3Q61602 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gli3Q61602 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gli3Q61602 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC17.14■□□□□ 0.33
Gli3Q61602 Gm5863-201ENSMUST00000121760 1008 ntBASIC17.14■□□□□ 0.33
Gli3Q61602 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gli3Q61602 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gli3Q61602 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC17.14■□□□□ 0.33
Gli3Q61602 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC17.14■□□□□ 0.33
Gli3Q61602 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms