Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.42□□□□□ -0.1
Ecm1Q61508 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ecm1Q61508 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.42□□□□□ -0.1
Ecm1Q61508 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ecm1Q61508 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.42□□□□□ -0.1
Ecm1Q61508 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Gm25700-201ENSMUST00000177693 110 ntBASIC14.42□□□□□ -0.1
Ecm1Q61508 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.42□□□□□ -0.1
Ecm1Q61508 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.42□□□□□ -0.1
Ecm1Q61508 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.42□□□□□ -0.1
Ecm1Q61508 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ecm1Q61508 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Ecm1Q61508 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.42□□□□□ -0.1
Ecm1Q61508 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ecm1Q61508 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ecm1Q61508 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ecm1Q61508 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ecm1Q61508 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ecm1Q61508 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ecm1Q61508 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ecm1Q61508 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.41□□□□□ -0.1
Ecm1Q61508 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ecm1Q61508 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ecm1Q61508 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.41□□□□□ -0.1
Ecm1Q61508 Gm12176-201ENSMUST00000121420 875 ntBASIC14.41□□□□□ -0.1
Ecm1Q61508 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.41□□□□□ -0.1
Ecm1Q61508 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.41□□□□□ -0.1
Ecm1Q61508 Gm22902-201ENSMUST00000158488 302 ntBASIC14.41□□□□□ -0.1
Ecm1Q61508 Gm8018-201ENSMUST00000173536 789 ntBASIC14.41□□□□□ -0.1
Ecm1Q61508 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ecm1Q61508 Mir6927-201ENSMUST00000184494 71 ntBASIC14.41□□□□□ -0.1
Ecm1Q61508 Gm44262-201ENSMUST00000204969 372 ntBASIC14.41□□□□□ -0.1
Ecm1Q61508 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ecm1Q61508 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Ecm1Q61508 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.41□□□□□ -0.1
Ecm1Q61508 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ecm1Q61508 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ecm1Q61508 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.41□□□□□ -0.1
Ecm1Q61508 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ecm1Q61508 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ecm1Q61508 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ecm1Q61508 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ecm1Q61508 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ecm1Q61508 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Ecm1Q61508 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.4□□□□□ -0.1
Ecm1Q61508 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ecm1Q61508 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.4□□□□□ -0.1
Ecm1Q61508 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.4□□□□□ -0.1
Ecm1Q61508 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.4□□□□□ -0.1
Ecm1Q61508 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Ecm1Q61508 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ecm1Q61508 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Ecm1Q61508 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ecm1Q61508 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.4□□□□□ -0.1
Ecm1Q61508 Gm12566-201ENSMUST00000121479 359 ntBASIC14.4□□□□□ -0.1
Ecm1Q61508 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.4□□□□□ -0.1
Ecm1Q61508 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Ecm1Q61508 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.4□□□□□ -0.1
Ecm1Q61508 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.4□□□□□ -0.1
Ecm1Q61508 Gm37986-201ENSMUST00000193285 383 ntBASIC14.4□□□□□ -0.1
Ecm1Q61508 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Ecm1Q61508 Gm42790-201ENSMUST00000201268 969 ntBASIC14.4□□□□□ -0.1
Ecm1Q61508 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ecm1Q61508 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ecm1Q61508 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.4□□□□□ -0.1
Ecm1Q61508 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ecm1Q61508 Mir339-201ENSMUST00000083659 96 ntBASIC14.4□□□□□ -0.1
Ecm1Q61508 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ecm1Q61508 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Ecm1Q61508 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ecm1Q61508 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms