Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nr1h4Q60641 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nr1h4Q60641 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nr1h4Q60641 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Nr1h4Q60641 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Nr1h4Q60641 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.51□□□□□ -0.41
Nr1h4Q60641 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.51□□□□□ -0.41
Nr1h4Q60641 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.51□□□□□ -0.41
Nr1h4Q60641 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.51□□□□□ -0.41
Nr1h4Q60641 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.51□□□□□ -0.41
Nr1h4Q60641 Gm12403-201ENSMUST00000121384 959 ntBASIC12.51□□□□□ -0.41
Nr1h4Q60641 Gm11594-201ENSMUST00000122313 162 ntBASIC12.51□□□□□ -0.41
Nr1h4Q60641 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.51□□□□□ -0.41
Nr1h4Q60641 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.51□□□□□ -0.41
Nr1h4Q60641 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.51□□□□□ -0.41
Nr1h4Q60641 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.51□□□□□ -0.41
Nr1h4Q60641 Gm38144-201ENSMUST00000192790 465 ntBASIC12.51□□□□□ -0.41
Nr1h4Q60641 Gm2213-201ENSMUST00000197485 688 ntBASIC12.51□□□□□ -0.41
Nr1h4Q60641 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nr1h4Q60641 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.51□□□□□ -0.41
Nr1h4Q60641 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.51□□□□□ -0.41
Nr1h4Q60641 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.51□□□□□ -0.41
Nr1h4Q60641 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.51□□□□□ -0.41
Nr1h4Q60641 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.51□□□□□ -0.41
Nr1h4Q60641 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.51□□□□□ -0.41
Nr1h4Q60641 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.51□□□□□ -0.41
Nr1h4Q60641 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nr1h4Q60641 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.5□□□□□ -0.41
Nr1h4Q60641 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Gm17795-201ENSMUST00000214505 757 ntBASIC12.5□□□□□ -0.41
Nr1h4Q60641 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.5□□□□□ -0.41
Nr1h4Q60641 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.5□□□□□ -0.41
Nr1h4Q60641 Gm5161-201ENSMUST00000075243 853 ntBASIC12.5□□□□□ -0.41
Nr1h4Q60641 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.5□□□□□ -0.41
Nr1h4Q60641 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.5□□□□□ -0.41
Nr1h4Q60641 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms