Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm43125-201ENSMUST00000201724 730 ntBASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm22065-201ENSMUST00000103753 110 ntBASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms