Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm22065-201ENSMUST00000103753 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm22066-201ENSMUST00000103761 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm24932-201ENSMUST00000103763 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm24115-201ENSMUST00000103799 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm22190-201ENSMUST00000103827 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm22191-201ENSMUST00000103831 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm24721-201ENSMUST00000103849 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm24543-201ENSMUST00000103867 82 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm28018-201ENSMUST00000103869 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm26399-201ENSMUST00000103937 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm25349-201ENSMUST00000177728 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm23616-201ENSMUST00000177797 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm25871-201ENSMUST00000177816 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm24752-201ENSMUST00000178240 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm24496-201ENSMUST00000178287 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm25649-201ENSMUST00000178476 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm25548-201ENSMUST00000178681 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm23147-201ENSMUST00000178841 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm26095-201ENSMUST00000179270 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm22171-201ENSMUST00000179283 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm23936-201ENSMUST00000179354 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm22619-201ENSMUST00000179516 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm25255-201ENSMUST00000179579 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm24755-201ENSMUST00000179691 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm26506-201ENSMUST00000179692 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm25086-201ENSMUST00000179931 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm23243-201ENSMUST00000180047 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm24659-201ENSMUST00000180212 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm24169-201ENSMUST00000180244 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm23689-201ENSMUST00000180354 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm27359-201ENSMUST00000184153 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm27785-201ENSMUST00000184268 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm27466-201ENSMUST00000184396 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm27703-201ENSMUST00000184836 110 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm29541-201ENSMUST00000191351 678 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm43514-201ENSMUST00000198852 424 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.27□□□□□ -0.44
Trim40Q3UWA4 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim40Q3UWA4 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim40Q3UWA4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim40Q3UWA4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim40Q3UWA4 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim40Q3UWA4 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.27□□□□□ -0.44
Trim40Q3UWA4 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim40Q3UWA4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim40Q3UWA4 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.27□□□□□ -0.44
Trim40Q3UWA4 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim40Q3UWA4 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim40Q3UWA4 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim40Q3UWA4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Gm10253-201ENSMUST00000194270 940 ntBASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms