Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Itm2b-204ENSMUST00000228637 783 ntBASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Brf2Q3UAW9 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Brf2Q3UAW9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Brf2Q3UAW9 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Brf2Q3UAW9 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Brf2Q3UAW9 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms