Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Tff1Q08423 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Tff1Q08423 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Tff1Q08423 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tff1Q08423 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Tff1Q08423 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.9□□□□□ -0.66
Tff1Q08423 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Tff1Q08423 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Tff1Q08423 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Gm12585-201ENSMUST00000117307 290 ntBASIC10.9□□□□□ -0.66
Tff1Q08423 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.9□□□□□ -0.66
Tff1Q08423 Gm15806-201ENSMUST00000120696 955 ntBASIC10.9□□□□□ -0.66
Tff1Q08423 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.9□□□□□ -0.66
Tff1Q08423 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.9□□□□□ -0.66
Tff1Q08423 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Gm17150-201ENSMUST00000165577 381 ntBASIC10.9□□□□□ -0.66
Tff1Q08423 Gm24420-201ENSMUST00000176676 59 ntBASIC10.9□□□□□ -0.66
Tff1Q08423 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Tff1Q08423 Mir6392-201ENSMUST00000184924 108 ntBASIC10.9□□□□□ -0.66
Tff1Q08423 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.9□□□□□ -0.66
Tff1Q08423 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.9□□□□□ -0.66
Tff1Q08423 Gm43630-201ENSMUST00000201550 776 ntBASIC10.9□□□□□ -0.66
Tff1Q08423 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.9□□□□□ -0.66
Tff1Q08423 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tff1Q08423 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tff1Q08423 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tff1Q08423 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tff1Q08423 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Tff1Q08423 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tff1Q08423 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Tff1Q08423 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Tff1Q08423 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Tff1Q08423 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Tff1Q08423 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Tff1Q08423 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Tff1Q08423 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.89□□□□□ -0.67
Tff1Q08423 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.89□□□□□ -0.67
Tff1Q08423 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Tff1Q08423 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Tff1Q08423 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.89□□□□□ -0.67
Tff1Q08423 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.89□□□□□ -0.67
Tff1Q08423 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Tff1Q08423 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 CT025610.1-201ENSMUST00000224552 1786 ntBASIC10.89□□□□□ -0.67
Tff1Q08423 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tff1Q08423 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms