Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.19□□□□□ -0.3
Pfdn6Q03958 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.19□□□□□ -0.3
Pfdn6Q03958 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn6Q03958 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn6Q03958 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn6Q03958 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn6Q03958 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn6Q03958 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn6Q03958 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.19□□□□□ -0.3
Pfdn6Q03958 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pfdn6Q03958 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Gm29608-201ENSMUST00000190444 463 ntBASIC13.18□□□□□ -0.3
Pfdn6Q03958 Gm44397-201ENSMUST00000195950 113 ntBASIC13.18□□□□□ -0.3
Pfdn6Q03958 Gm6983-201ENSMUST00000214912 628 ntBASIC13.18□□□□□ -0.3
Pfdn6Q03958 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Gm18624-201ENSMUST00000220966 658 ntBASIC13.18□□□□□ -0.3
Pfdn6Q03958 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Grk6-205ENSMUST00000224653 2976 ntBASIC13.18□□□□□ -0.3
Pfdn6Q03958 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Pfdn6Q03958 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.17□□□□□ -0.3
Pfdn6Q03958 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.17□□□□□ -0.3
Pfdn6Q03958 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.17□□□□□ -0.3
Pfdn6Q03958 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.17□□□□□ -0.3
Pfdn6Q03958 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.17□□□□□ -0.3
Pfdn6Q03958 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Mir7654-201ENSMUST00000185082 70 ntBASIC13.17□□□□□ -0.3
Pfdn6Q03958 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.17□□□□□ -0.3
Pfdn6Q03958 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.17□□□□□ -0.3
Pfdn6Q03958 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.17□□□□□ -0.3
Pfdn6Q03958 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.17□□□□□ -0.3
Pfdn6Q03958 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms