Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm7789-202ENSMUST00000211273 1400 ntBASIC16.34■□□□□ 0.21
Smarcc1P97496 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcc1P97496 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcc1P97496 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Smarcc1P97496 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Smarcc1P97496 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcc1P97496 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcc1P97496 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcc1P97496 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcc1P97496 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Smarcc1P97496 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc1P97496 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc1P97496 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc1P97496 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc1P97496 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC16.33■□□□□ 0.2
Smarcc1P97496 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc1P97496 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Smarcc1P97496 Gm23200-201ENSMUST00000104379 132 ntBASIC16.33■□□□□ 0.2
Smarcc1P97496 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Smarcc1P97496 Gm8856-201ENSMUST00000185254 1144 ntBASIC16.33■□□□□ 0.2
Smarcc1P97496 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC16.33■□□□□ 0.2
Smarcc1P97496 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC16.33■□□□□ 0.2
Smarcc1P97496 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc1P97496 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Smarcc1P97496 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc1P97496 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc1P97496 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc1P97496 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc1P97496 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc1P97496 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Smarcc1P97496 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc1P97496 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc1P97496 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc1P97496 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smarcc1P97496 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc1P97496 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc1P97496 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Smarcc1P97496 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Smarcc1P97496 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc1P97496 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC16.32■□□□□ 0.2
Smarcc1P97496 Gm12058-201ENSMUST00000118614 437 ntBASIC16.32■□□□□ 0.2
Smarcc1P97496 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc1P97496 Gm37827-201ENSMUST00000194486 1542 ntBASIC16.32■□□□□ 0.2
Smarcc1P97496 Gm43416-201ENSMUST00000201916 1015 ntBASIC16.32■□□□□ 0.2
Smarcc1P97496 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Smarcc1P97496 Gm3287-205ENSMUST00000228893 1332 ntBASIC16.32■□□□□ 0.2
Smarcc1P97496 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc1P97496 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Smarcc1P97496 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc1P97496 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc1P97496 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Smarcc1P97496 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc1P97496 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc1P97496 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc1P97496 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Smarcc1P97496 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcc1P97496 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc1P97496 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc1P97496 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc1P97496 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.31■□□□□ 0.2
Smarcc1P97496 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc1P97496 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Smarcc1P97496 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc1P97496 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc1P97496 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc1P97496 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc1P97496 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Smarcc1P97496 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc1P97496 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc1P97496 Gm43908-201ENSMUST00000205074 1472 ntBASIC16.31■□□□□ 0.2
Smarcc1P97496 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Smarcc1P97496 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Smarcc1P97496 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc1P97496 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Smarcc1P97496 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc1P97496 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC16.31■□□□□ 0.2
Smarcc1P97496 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Smarcc1P97496 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC16.31■□□□□ 0.2
Smarcc1P97496 Gm38092-201ENSMUST00000195600 653 ntBASIC16.31■□□□□ 0.2
Smarcc1P97496 AC153974.2-201ENSMUST00000218577 1025 ntBASIC16.31■□□□□ 0.2
Smarcc1P97496 CT009718.3-201ENSMUST00000221116 367 ntBASIC16.31■□□□□ 0.2
Smarcc1P97496 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC16.31■□□□□ 0.2
Smarcc1P97496 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc1P97496 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC16.31■□□□□ 0.2
Smarcc1P97496 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc1P97496 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.31■□□□□ 0.2
Smarcc1P97496 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Smarcc1P97496 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc1P97496 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc1P97496 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc1P97496 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Smarcc1P97496 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc1P97496 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc1P97496 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc1P97496 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcc1P97496 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcc1P97496 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.3■□□□□ 0.2
Smarcc1P97496 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcc1P97496 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcc1P97496 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms