Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Shox2P70390 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.93□□□□□ -0.34
Shox2P70390 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.93□□□□□ -0.34
Shox2P70390 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Shox2P70390 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.93□□□□□ -0.34
Shox2P70390 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Shox2P70390 Gm18049-201ENSMUST00000208909 581 ntBASIC12.93□□□□□ -0.34
Shox2P70390 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.93□□□□□ -0.34
Shox2P70390 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.93□□□□□ -0.34
Shox2P70390 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.93□□□□□ -0.34
Shox2P70390 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Shox2P70390 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Shox2P70390 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.93□□□□□ -0.34
Shox2P70390 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Shox2P70390 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Shox2P70390 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.93□□□□□ -0.34
Shox2P70390 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shox2P70390 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.92□□□□□ -0.34
Shox2P70390 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.92□□□□□ -0.34
Shox2P70390 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.92□□□□□ -0.34
Shox2P70390 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.92□□□□□ -0.34
Shox2P70390 Gm11025-201ENSMUST00000140773 466 ntBASIC12.92□□□□□ -0.34
Shox2P70390 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Shox2P70390 Gm9630-201ENSMUST00000178304 885 ntBASIC12.92□□□□□ -0.34
Shox2P70390 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Shox2P70390 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.92□□□□□ -0.34
Shox2P70390 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.92□□□□□ -0.34
Shox2P70390 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.92□□□□□ -0.34
Shox2P70390 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.92□□□□□ -0.34
Shox2P70390 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shox2P70390 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Shox2P70390 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Shox2P70390 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Shox2P70390 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shox2P70390 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.91□□□□□ -0.34
Shox2P70390 Gm24589-201ENSMUST00000116692 94 ntBASIC12.91□□□□□ -0.34
Shox2P70390 Gm12350-201ENSMUST00000121208 462 ntBASIC12.91□□□□□ -0.34
Shox2P70390 Gm11452-201ENSMUST00000122376 690 ntBASIC12.91□□□□□ -0.34
Shox2P70390 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.91□□□□□ -0.34
Shox2P70390 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.91□□□□□ -0.34
Shox2P70390 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.91□□□□□ -0.34
Shox2P70390 Mir5131-201ENSMUST00000175426 93 ntBASIC12.91□□□□□ -0.34
Shox2P70390 Gm4804-201ENSMUST00000182234 999 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms