Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cux2P70298 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cux2P70298 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cux2P70298 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cux2P70298 Gm24891-201ENSMUST00000104391 136 ntBASIC20.98■□□□□ 0.95
Cux2P70298 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC20.98■□□□□ 0.95
Cux2P70298 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cux2P70298 Gm7395-201ENSMUST00000216059 1045 ntBASIC20.98■□□□□ 0.95
Cux2P70298 Gm6867-201ENSMUST00000219165 425 ntBASIC20.98■□□□□ 0.95
Cux2P70298 Gm5455-201ENSMUST00000058710 715 ntBASIC20.98■□□□□ 0.95
Cux2P70298 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cux2P70298 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cux2P70298 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cux2P70298 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cux2P70298 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cux2P70298 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cux2P70298 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Cux2P70298 Gm14724-201ENSMUST00000118400 537 ntBASIC20.97■□□□□ 0.95
Cux2P70298 Gm14585-201ENSMUST00000120713 634 ntBASIC20.97■□□□□ 0.95
Cux2P70298 Gm15595-201ENSMUST00000120840 961 ntBASIC20.97■□□□□ 0.95
Cux2P70298 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC20.97■□□□□ 0.95
Cux2P70298 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cux2P70298 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cux2P70298 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cux2P70298 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cux2P70298 Gm44980-201ENSMUST00000205826 314 ntBASIC20.97■□□□□ 0.95
Cux2P70298 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC20.97■□□□□ 0.95
Cux2P70298 AC154184.3-201ENSMUST00000225620 1090 ntBASIC20.97■□□□□ 0.95
Cux2P70298 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cux2P70298 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cux2P70298 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cux2P70298 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cux2P70298 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cux2P70298 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cux2P70298 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cux2P70298 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cux2P70298 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cux2P70298 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cux2P70298 Gm2420-202ENSMUST00000202224 2249 ntBASIC20.96■□□□□ 0.95
Cux2P70298 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cux2P70298 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cux2P70298 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC20.96■□□□□ 0.95
Cux2P70298 Gm12628-201ENSMUST00000122193 382 ntBASIC20.96■□□□□ 0.95
Cux2P70298 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC20.96■□□□□ 0.95
Cux2P70298 Cd63-ps-202ENSMUST00000154992 717 ntBASIC20.96■□□□□ 0.95
Cux2P70298 Gm8100-201ENSMUST00000182906 988 ntBASIC20.96■□□□□ 0.95
Cux2P70298 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cux2P70298 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cux2P70298 Gm26448-201ENSMUST00000082446 203 ntBASIC20.96■□□□□ 0.95
Cux2P70298 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cux2P70298 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Cux2P70298 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cux2P70298 Gm9025-201ENSMUST00000122415 1575 ntBASIC20.96■□□□□ 0.95
Cux2P70298 AC113060.1-201ENSMUST00000225689 1573 ntBASIC20.96■□□□□ 0.95
Cux2P70298 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cux2P70298 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cux2P70298 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cux2P70298 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Cux2P70298 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cux2P70298 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cux2P70298 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Cux2P70298 Gm12623-201ENSMUST00000119849 1983 ntBASIC20.96■□□□□ 0.95
Cux2P70298 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cux2P70298 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cux2P70298 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Cux2P70298 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Cux2P70298 Gm11509-201ENSMUST00000117358 325 ntBASIC20.95■□□□□ 0.95
Cux2P70298 Gm15703-201ENSMUST00000120250 880 ntBASIC20.95■□□□□ 0.95
Cux2P70298 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC20.95■□□□□ 0.95
Cux2P70298 Gm4726-201ENSMUST00000135604 736 ntBASIC20.95■□□□□ 0.95
Cux2P70298 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC20.95■□□□□ 0.95
Cux2P70298 Gm6019-201ENSMUST00000148369 736 ntBASIC20.95■□□□□ 0.95
Cux2P70298 Gm43520-201ENSMUST00000197996 164 ntBASIC20.95■□□□□ 0.95
Cux2P70298 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Cux2P70298 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Cux2P70298 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Cux2P70298 Gm8325-201ENSMUST00000099086 453 ntBASIC20.95■□□□□ 0.95
Cux2P70298 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
Cux2P70298 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cux2P70298 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cux2P70298 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC20.95■□□□□ 0.94
Cux2P70298 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cux2P70298 Gm29340-201ENSMUST00000188763 3854 ntBASIC20.95■□□□□ 0.94
Cux2P70298 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cux2P70298 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cux2P70298 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cux2P70298 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cux2P70298 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
Cux2P70298 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cux2P70298 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cux2P70298 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cux2P70298 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Cux2P70298 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC20.95■□□□□ 0.94
Cux2P70298 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC20.95■□□□□ 0.94
Cux2P70298 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cux2P70298 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cux2P70298 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC20.95■□□□□ 0.94
Cux2P70298 Gm43184-201ENSMUST00000197247 542 ntBASIC20.95■□□□□ 0.94
Cux2P70298 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC20.95■□□□□ 0.94
Cux2P70298 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms