Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ybx1P62960 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ybx1P62960 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ybx1P62960 Gm12502-201ENSMUST00000120197 444 ntBASIC13.4□□□□□ -0.26
Ybx1P62960 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.4□□□□□ -0.26
Ybx1P62960 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.4□□□□□ -0.26
Ybx1P62960 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ybx1P62960 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ybx1P62960 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.4□□□□□ -0.26
Ybx1P62960 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ybx1P62960 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ybx1P62960 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ybx1P62960 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ybx1P62960 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ybx1P62960 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ybx1P62960 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ybx1P62960 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ybx1P62960 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ybx1P62960 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ybx1P62960 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.4□□□□□ -0.26
Ybx1P62960 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.4□□□□□ -0.26
Ybx1P62960 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ybx1P62960 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ybx1P62960 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ybx1P62960 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ybx1P62960 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ybx1P62960 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
Ybx1P62960 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Ybx1P62960 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ybx1P62960 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ybx1P62960 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ybx1P62960 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.4□□□□□ -0.26
Ybx1P62960 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ybx1P62960 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ybx1P62960 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Ybx1P62960 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ybx1P62960 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ybx1P62960 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ybx1P62960 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Snord83b-201ENSMUST00000104546 94 ntBASIC13.39□□□□□ -0.27
Ybx1P62960 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.39□□□□□ -0.27
Ybx1P62960 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.39□□□□□ -0.27
Ybx1P62960 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.39□□□□□ -0.27
Ybx1P62960 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.39□□□□□ -0.27
Ybx1P62960 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.39□□□□□ -0.27
Ybx1P62960 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.39□□□□□ -0.27
Ybx1P62960 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ybx1P62960 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ybx1P62960 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.39□□□□□ -0.27
Ybx1P62960 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ybx1P62960 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Ybx1P62960 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ybx1P62960 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.39□□□□□ -0.27
Ybx1P62960 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ybx1P62960 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ybx1P62960 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ybx1P62960 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ybx1P62960 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ybx1P62960 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ybx1P62960 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ybx1P62960 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ybx1P62960 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms