Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Timp3P39876 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC10.77□□□□□ -0.69
Timp3P39876 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Timp3P39876 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Timp3P39876 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Timp3P39876 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Timp3P39876 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Timp3P39876 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Timp3P39876 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Timp3P39876 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Timp3P39876 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Timp3P39876 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Timp3P39876 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Timp3P39876 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Timp3P39876 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Timp3P39876 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.76□□□□□ -0.69
Timp3P39876 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Timp3P39876 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC10.76□□□□□ -0.69
Timp3P39876 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.76□□□□□ -0.69
Timp3P39876 Gm12384-201ENSMUST00000119228 919 ntBASIC10.76□□□□□ -0.69
Timp3P39876 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.76□□□□□ -0.69
Timp3P39876 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Timp3P39876 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Timp3P39876 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.76□□□□□ -0.69
Timp3P39876 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Timp3P39876 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.76□□□□□ -0.69
Timp3P39876 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.76□□□□□ -0.69
Timp3P39876 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Timp3P39876 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Timp3P39876 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC10.76□□□□□ -0.69
Timp3P39876 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Timp3P39876 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Timp3P39876 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Timp3P39876 Gm8337-201ENSMUST00000187358 1938 ntBASIC10.76□□□□□ -0.69
Timp3P39876 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Timp3P39876 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Timp3P39876 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Timp3P39876 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Timp3P39876 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Timp3P39876 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Gm12957-201ENSMUST00000117835 377 ntBASIC10.75□□□□□ -0.69
Timp3P39876 Gm10156-201ENSMUST00000122364 462 ntBASIC10.75□□□□□ -0.69
Timp3P39876 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.75□□□□□ -0.69
Timp3P39876 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Timp3P39876 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Timp3P39876 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Timp3P39876 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Timp3P39876 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Timp3P39876 Gm43818-201ENSMUST00000200605 466 ntBASIC10.75□□□□□ -0.69
Timp3P39876 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Timp3P39876 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms