Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fen1P39749 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Fen1P39749 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Fen1P39749 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Fen1P39749 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.2□□□□□ -0.3
Fen1P39749 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Mir7023-201ENSMUST00000185093 64 ntBASIC13.2□□□□□ -0.3
Fen1P39749 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.2□□□□□ -0.3
Fen1P39749 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.2□□□□□ -0.3
Fen1P39749 Gm9229-201ENSMUST00000222777 126 ntBASIC13.2□□□□□ -0.3
Fen1P39749 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Fen1P39749 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.2□□□□□ -0.3
Fen1P39749 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Fen1P39749 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.2□□□□□ -0.3
Fen1P39749 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Fen1P39749 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Fen1P39749 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.19□□□□□ -0.3
Fen1P39749 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.19□□□□□ -0.3
Fen1P39749 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Fen1P39749 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Fen1P39749 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Fen1P39749 Gm6912-201ENSMUST00000117218 544 ntBASIC13.19□□□□□ -0.3
Fen1P39749 Gm15653-201ENSMUST00000119247 907 ntBASIC13.19□□□□□ -0.3
Fen1P39749 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.19□□□□□ -0.3
Fen1P39749 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.19□□□□□ -0.3
Fen1P39749 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Fen1P39749 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Fen1P39749 Gm4804-201ENSMUST00000182234 999 ntBASIC13.19□□□□□ -0.3
Fen1P39749 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Fen1P39749 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Fen1P39749 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.19□□□□□ -0.3
Fen1P39749 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Fen1P39749 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Fen1P39749 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Fen1P39749 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms