Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LdlrP35951 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.06□□□□□ -0.32
LdlrP35951 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LdlrP35951 Gm6007-201ENSMUST00000208170 823 ntBASIC13.06□□□□□ -0.32
LdlrP35951 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LdlrP35951 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LdlrP35951 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LdlrP35951 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.06□□□□□ -0.32
LdlrP35951 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LdlrP35951 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LdlrP35951 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.06□□□□□ -0.32
LdlrP35951 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LdlrP35951 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LdlrP35951 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LdlrP35951 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.05□□□□□ -0.32
LdlrP35951 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
LdlrP35951 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.05□□□□□ -0.32
LdlrP35951 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
LdlrP35951 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
LdlrP35951 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
LdlrP35951 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.05□□□□□ -0.32
LdlrP35951 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.05□□□□□ -0.32
LdlrP35951 Gm27772-201ENSMUST00000184900 187 ntBASIC13.05□□□□□ -0.32
LdlrP35951 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.05□□□□□ -0.32
LdlrP35951 Gm5035-201ENSMUST00000215581 927 ntBASIC13.05□□□□□ -0.32
LdlrP35951 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.05□□□□□ -0.32
LdlrP35951 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.05□□□□□ -0.32
LdlrP35951 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
LdlrP35951 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LdlrP35951 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.04□□□□□ -0.32
LdlrP35951 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
LdlrP35951 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.04□□□□□ -0.32
LdlrP35951 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.04□□□□□ -0.32
LdlrP35951 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.04□□□□□ -0.32
LdlrP35951 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
LdlrP35951 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LdlrP35951 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.04□□□□□ -0.32
LdlrP35951 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.04□□□□□ -0.32
LdlrP35951 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.04□□□□□ -0.32
LdlrP35951 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.04□□□□□ -0.32
LdlrP35951 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.04□□□□□ -0.32
LdlrP35951 Gm12403-201ENSMUST00000121384 959 ntBASIC13.04□□□□□ -0.32
LdlrP35951 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.04□□□□□ -0.32
LdlrP35951 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.04□□□□□ -0.32
LdlrP35951 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.04□□□□□ -0.32
LdlrP35951 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.04□□□□□ -0.32
LdlrP35951 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.04□□□□□ -0.32
LdlrP35951 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.04□□□□□ -0.32
LdlrP35951 Gm18905-201ENSMUST00000205454 928 ntBASIC13.04□□□□□ -0.32
LdlrP35951 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.04□□□□□ -0.32
LdlrP35951 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
LdlrP35951 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
LdlrP35951 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LdlrP35951 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.04□□□□□ -0.32
LdlrP35951 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms