Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.42□□□□□ -0.26
Mmp13P33435 Gm7653-201ENSMUST00000214567 508 ntBASIC13.42□□□□□ -0.26
Mmp13P33435 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.42□□□□□ -0.26
Mmp13P33435 Gm17330-201ENSMUST00000221047 165 ntBASIC13.42□□□□□ -0.26
Mmp13P33435 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.42□□□□□ -0.26
Mmp13P33435 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp13P33435 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp13P33435 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp13P33435 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Mmp13P33435 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp13P33435 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Mmp13P33435 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.42□□□□□ -0.26
Mmp13P33435 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp13P33435 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp13P33435 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
Mmp13P33435 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp13P33435 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp13P33435 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.42□□□□□ -0.26
Mmp13P33435 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp13P33435 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Mmp13P33435 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.41□□□□□ -0.26
Mmp13P33435 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Mmp13P33435 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.41□□□□□ -0.26
Mmp13P33435 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Mmp13P33435 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.41□□□□□ -0.26
Mmp13P33435 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.41□□□□□ -0.26
Mmp13P33435 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Mmp13P33435 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Mmp13P33435 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Gm12341-201ENSMUST00000119724 503 ntBASIC13.41□□□□□ -0.26
Mmp13P33435 Gm12490-201ENSMUST00000120255 560 ntBASIC13.41□□□□□ -0.26
Mmp13P33435 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.41□□□□□ -0.26
Mmp13P33435 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Mmp13P33435 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.41□□□□□ -0.26
Mmp13P33435 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.41□□□□□ -0.26
Mmp13P33435 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.41□□□□□ -0.26
Mmp13P33435 Gm9908-201ENSMUST00000211534 448 ntBASIC13.41□□□□□ -0.26
Mmp13P33435 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Mmp13P33435 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Mmp13P33435 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Mmp13P33435 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Mmp13P33435 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.41□□□□□ -0.26
Mmp13P33435 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.41□□□□□ -0.26
Mmp13P33435 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Mmp13P33435 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Mmp13P33435 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.4□□□□□ -0.26
Mmp13P33435 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.4□□□□□ -0.26
Mmp13P33435 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.4□□□□□ -0.26
Mmp13P33435 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.4□□□□□ -0.26
Mmp13P33435 Gm18307-201ENSMUST00000206864 949 ntBASIC13.4□□□□□ -0.26
Mmp13P33435 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.4□□□□□ -0.26
Mmp13P33435 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Mmp13P33435 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Mmp13P33435 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Mmp13P33435 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Mmp13P33435 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Mmp13P33435 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms