Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cd28P31041 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cd28P31041 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cd28P31041 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cd28P31041 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Cd28P31041 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 Gm22065-201ENSMUST00000103753 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm22066-201ENSMUST00000103761 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm24932-201ENSMUST00000103763 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm24115-201ENSMUST00000103799 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm22190-201ENSMUST00000103827 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm22191-201ENSMUST00000103831 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm24721-201ENSMUST00000103849 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm28018-201ENSMUST00000103869 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm26399-201ENSMUST00000103937 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.52□□□□□ -0.57
Cd28P31041 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.52□□□□□ -0.57
Cd28P31041 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.52□□□□□ -0.57
Cd28P31041 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.52□□□□□ -0.57
Cd28P31041 Gm25349-201ENSMUST00000177728 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm23616-201ENSMUST00000177797 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm25871-201ENSMUST00000177816 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm24752-201ENSMUST00000178240 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm24496-201ENSMUST00000178287 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm25649-201ENSMUST00000178476 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm25548-201ENSMUST00000178681 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm23147-201ENSMUST00000178841 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm26095-201ENSMUST00000179270 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm22171-201ENSMUST00000179283 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm23936-201ENSMUST00000179354 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm22619-201ENSMUST00000179516 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm25255-201ENSMUST00000179579 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm24755-201ENSMUST00000179691 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm26506-201ENSMUST00000179692 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm25086-201ENSMUST00000179931 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm23243-201ENSMUST00000180047 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm24659-201ENSMUST00000180212 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm24169-201ENSMUST00000180244 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm23689-201ENSMUST00000180354 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm27359-201ENSMUST00000184153 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm27785-201ENSMUST00000184268 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm27466-201ENSMUST00000184396 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm27703-201ENSMUST00000184836 110 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm43474-201ENSMUST00000196415 774 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm19931-201ENSMUST00000198920 368 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.52□□□□□ -0.57
Cd28P31041 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.52□□□□□ -0.57
Cd28P31041 Shd-206ENSMUST00000225145 998 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Cd28P31041 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.52□□□□□ -0.57
Cd28P31041 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.52□□□□□ -0.57
Cd28P31041 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Cd28P31041 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.52□□□□□ -0.57
Cd28P31041 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.52□□□□□ -0.57
Cd28P31041 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Cd28P31041 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cd28P31041 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cd28P31041 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cd28P31041 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.51□□□□□ -0.57
Cd28P31041 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cd28P31041 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cd28P31041 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cd28P31041 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.51□□□□□ -0.57
Cd28P31041 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.51□□□□□ -0.57
Cd28P31041 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cd28P31041 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cd28P31041 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cd28P31041 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cd28P31041 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cd28P31041 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cd28P31041 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.51□□□□□ -0.57
Cd28P31041 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Cd28P31041 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cd28P31041 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cd28P31041 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cd28P31041 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms