Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clk1P22518 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clk1P22518 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clk1P22518 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clk1P22518 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clk1P22518 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.29□□□□□ -0.44
Clk1P22518 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.29□□□□□ -0.44
Clk1P22518 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clk1P22518 Gm44855-201ENSMUST00000205725 362 ntBASIC12.29□□□□□ -0.44
Clk1P22518 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clk1P22518 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.29□□□□□ -0.44
Clk1P22518 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Clk1P22518 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.29□□□□□ -0.44
Clk1P22518 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clk1P22518 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.29□□□□□ -0.44
Clk1P22518 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clk1P22518 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clk1P22518 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
Clk1P22518 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clk1P22518 Syt7-205ENSMUST00000224135 1557 ntBASIC12.29□□□□□ -0.44
Clk1P22518 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.29□□□□□ -0.44
Clk1P22518 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clk1P22518 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clk1P22518 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clk1P22518 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clk1P22518 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.29□□□□□ -0.44
Clk1P22518 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Clk1P22518 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clk1P22518 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clk1P22518 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.28□□□□□ -0.44
Clk1P22518 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.28□□□□□ -0.44
Clk1P22518 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.28□□□□□ -0.44
Clk1P22518 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.28□□□□□ -0.44
Clk1P22518 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Gm15371-201ENSMUST00000117057 784 ntBASIC12.28□□□□□ -0.44
Clk1P22518 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.28□□□□□ -0.44
Clk1P22518 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Clk1P22518 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.28□□□□□ -0.44
Clk1P22518 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Gm5866-201ENSMUST00000177881 973 ntBASIC12.28□□□□□ -0.44
Clk1P22518 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.28□□□□□ -0.44
Clk1P22518 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Clk1P22518 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Clk1P22518 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.28□□□□□ -0.44
Clk1P22518 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.28□□□□□ -0.44
Clk1P22518 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Clk1P22518 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.28□□□□□ -0.44
Clk1P22518 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Clk1P22518 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clk1P22518 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Clk1P22518 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clk1P22518 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clk1P22518 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clk1P22518 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clk1P22518 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.27□□□□□ -0.44
Clk1P22518 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.27□□□□□ -0.44
Clk1P22518 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Clk1P22518 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.44
Clk1P22518 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clk1P22518 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clk1P22518 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clk1P22518 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.27□□□□□ -0.45
Clk1P22518 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clk1P22518 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.27□□□□□ -0.45
Clk1P22518 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clk1P22518 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Clk1P22518 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clk1P22518 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clk1P22518 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.27□□□□□ -0.45
Clk1P22518 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms