Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.6□□□□□ -0.39
BdnfP21237 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.6□□□□□ -0.39
BdnfP21237 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
BdnfP21237 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
BdnfP21237 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
BdnfP21237 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.59□□□□□ -0.39
BdnfP21237 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.59□□□□□ -0.39
BdnfP21237 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.59□□□□□ -0.39
BdnfP21237 Gm15487-201ENSMUST00000122373 465 ntBASIC12.59□□□□□ -0.39
BdnfP21237 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.59□□□□□ -0.39
BdnfP21237 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.59□□□□□ -0.39
BdnfP21237 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.59□□□□□ -0.39
BdnfP21237 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Map1b-203ENSMUST00000223725 2669 ntBASIC12.59□□□□□ -0.39
BdnfP21237 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
BdnfP21237 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.59□□□□□ -0.39
BdnfP21237 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.59□□□□□ -0.39
BdnfP21237 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
BdnfP21237 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
BdnfP21237 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.58□□□□□ -0.39
BdnfP21237 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
BdnfP21237 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
BdnfP21237 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.58□□□□□ -0.4
BdnfP21237 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.58□□□□□ -0.4
BdnfP21237 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.58□□□□□ -0.4
BdnfP21237 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
BdnfP21237 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
BdnfP21237 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.58□□□□□ -0.4
BdnfP21237 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.58□□□□□ -0.4
BdnfP21237 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.58□□□□□ -0.4
BdnfP21237 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
BdnfP21237 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
BdnfP21237 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.58□□□□□ -0.4
BdnfP21237 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
BdnfP21237 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms