Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa6P09092 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa6P09092 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
Hoxa6P09092 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa6P09092 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa6P09092 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa6P09092 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa6P09092 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa6P09092 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hoxa6P09092 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.33□□□□□ -0.6
Hoxa6P09092 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa6P09092 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.32□□□□□ -0.6
Hoxa6P09092 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.32□□□□□ -0.6
Hoxa6P09092 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Hoxa6P09092 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Hoxa6P09092 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Hoxa6P09092 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Gm13369-201ENSMUST00000119442 987 ntBASIC11.32□□□□□ -0.6
Hoxa6P09092 Gm13123-201ENSMUST00000122173 492 ntBASIC11.32□□□□□ -0.6
Hoxa6P09092 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.32□□□□□ -0.6
Hoxa6P09092 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.32□□□□□ -0.6
Hoxa6P09092 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.32□□□□□ -0.6
Hoxa6P09092 Gm19184-201ENSMUST00000196798 928 ntBASIC11.32□□□□□ -0.6
Hoxa6P09092 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.32□□□□□ -0.6
Hoxa6P09092 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.32□□□□□ -0.6
Hoxa6P09092 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Hoxa6P09092 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.32□□□□□ -0.6
Hoxa6P09092 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Hoxa6P09092 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.32□□□□□ -0.6
Hoxa6P09092 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hoxa6P09092 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.32□□□□□ -0.6
Hoxa6P09092 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hoxa6P09092 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa6P09092 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hoxa6P09092 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hoxa6P09092 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hoxa6P09092 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Hoxa6P09092 Pck2-205ENSMUST00000226352 2784 ntBASIC11.31□□□□□ -0.6
Hoxa6P09092 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Hoxa6P09092 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.31□□□□□ -0.6
Hoxa6P09092 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 Gm16379-201ENSMUST00000161469 348 ntBASIC11.31□□□□□ -0.6
Hoxa6P09092 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hoxa6P09092 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.31□□□□□ -0.6
Hoxa6P09092 Gm8762-201ENSMUST00000193486 339 ntBASIC11.31□□□□□ -0.6
Hoxa6P09092 Gm42627-201ENSMUST00000197347 224 ntBASIC11.31□□□□□ -0.6
Hoxa6P09092 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.31□□□□□ -0.6
Hoxa6P09092 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.31□□□□□ -0.6
Hoxa6P09092 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Hoxa6P09092 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Hoxa6P09092 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Hoxa6P09092 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.31□□□□□ -0.6
Hoxa6P09092 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.31□□□□□ -0.6
Hoxa6P09092 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hoxa6P09092 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Hoxa6P09092 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hoxa6P09092 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms