Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TnfP06804 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TnfP06804 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.88□□□□□ -0.19
TnfP06804 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TnfP06804 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TnfP06804 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TnfP06804 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.88□□□□□ -0.19
TnfP06804 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
TnfP06804 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TnfP06804 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TnfP06804 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TnfP06804 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TnfP06804 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
TnfP06804 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
TnfP06804 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
TnfP06804 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TnfP06804 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TnfP06804 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 Snord83b-201ENSMUST00000104546 94 ntBASIC13.87□□□□□ -0.19
TnfP06804 Gm14723-201ENSMUST00000118686 215 ntBASIC13.87□□□□□ -0.19
TnfP06804 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.87□□□□□ -0.19
TnfP06804 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.87□□□□□ -0.19
TnfP06804 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.87□□□□□ -0.19
TnfP06804 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.87□□□□□ -0.19
TnfP06804 Gm38266-201ENSMUST00000194931 421 ntBASIC13.87□□□□□ -0.19
TnfP06804 Gm32025-201ENSMUST00000217960 307 ntBASIC13.87□□□□□ -0.19
TnfP06804 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TnfP06804 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TnfP06804 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TnfP06804 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TnfP06804 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.87□□□□□ -0.19
TnfP06804 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TnfP06804 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.87□□□□□ -0.19
TnfP06804 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TnfP06804 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.86□□□□□ -0.19
TnfP06804 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TnfP06804 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.86□□□□□ -0.19
TnfP06804 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Gm13786-201ENSMUST00000122371 333 ntBASIC13.86□□□□□ -0.19
TnfP06804 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Gm8738-201ENSMUST00000172606 329 ntBASIC13.86□□□□□ -0.19
TnfP06804 Gm22121-201ENSMUST00000175148 54 ntBASIC13.86□□□□□ -0.19
TnfP06804 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.86□□□□□ -0.19
TnfP06804 Gm29396-201ENSMUST00000185659 716 ntBASIC13.86□□□□□ -0.19
TnfP06804 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.86□□□□□ -0.19
TnfP06804 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TnfP06804 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TnfP06804 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TnfP06804 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TnfP06804 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
TnfP06804 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TnfP06804 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
TnfP06804 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms