Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tcof1O08784 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tcof1O08784 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tcof1O08784 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tcof1O08784 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tcof1O08784 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.33■□□□□ 0.04
Tcof1O08784 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.33■□□□□ 0.04
Tcof1O08784 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tcof1O08784 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tcof1O08784 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tcof1O08784 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Tcof1O08784 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tcof1O08784 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tcof1O08784 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tcof1O08784 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tcof1O08784 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Tcof1O08784 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tcof1O08784 Gm22018-201ENSMUST00000104357 131 ntBASIC15.32■□□□□ 0.04
Tcof1O08784 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tcof1O08784 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tcof1O08784 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC15.32■□□□□ 0.04
Tcof1O08784 Gm5896-201ENSMUST00000189662 1024 ntBASIC15.32■□□□□ 0.04
Tcof1O08784 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC15.32■□□□□ 0.04
Tcof1O08784 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Tcof1O08784 Olfr582-201ENSMUST00000098212 960 ntBASIC15.32■□□□□ 0.04
Tcof1O08784 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tcof1O08784 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tcof1O08784 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tcof1O08784 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tcof1O08784 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tcof1O08784 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Tcof1O08784 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Tcof1O08784 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tcof1O08784 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tcof1O08784 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tcof1O08784 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.31■□□□□ 0.04
Tcof1O08784 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.31■□□□□ 0.04
Tcof1O08784 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Tcof1O08784 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tcof1O08784 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tcof1O08784 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tcof1O08784 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tcof1O08784 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Tcof1O08784 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tcof1O08784 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tcof1O08784 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tcof1O08784 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tcof1O08784 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.31■□□□□ 0.04
Tcof1O08784 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.31■□□□□ 0.04
Tcof1O08784 Gm12363-201ENSMUST00000122250 668 ntBASIC15.31■□□□□ 0.04
Tcof1O08784 Gm2231-201ENSMUST00000125661 612 ntBASIC15.31■□□□□ 0.04
Tcof1O08784 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.31■□□□□ 0.04
Tcof1O08784 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.31■□□□□ 0.04
Tcof1O08784 Gm6458-201ENSMUST00000211573 635 ntBASIC15.31■□□□□ 0.04
Tcof1O08784 Gm9257-201ENSMUST00000221254 232 ntBASIC15.31■□□□□ 0.04
Tcof1O08784 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.31■□□□□ 0.04
Tcof1O08784 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tcof1O08784 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tcof1O08784 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Tcof1O08784 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tcof1O08784 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tcof1O08784 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tcof1O08784 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tcof1O08784 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.31■□□□□ 0.04
Tcof1O08784 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tcof1O08784 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tcof1O08784 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tcof1O08784 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tcof1O08784 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tcof1O08784 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tcof1O08784 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tcof1O08784 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.3■□□□□ 0.04
Tcof1O08784 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.3■□□□□ 0.04
Tcof1O08784 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
Tcof1O08784 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Tcof1O08784 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tcof1O08784 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Tcof1O08784 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tcof1O08784 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Tcof1O08784 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.3■□□□□ 0.04
Tcof1O08784 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.3■□□□□ 0.04
Tcof1O08784 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tcof1O08784 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.3■□□□□ 0.04
Tcof1O08784 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.3■□□□□ 0.04
Tcof1O08784 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Tcof1O08784 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.3■□□□□ 0.04
Tcof1O08784 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tcof1O08784 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tcof1O08784 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tcof1O08784 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.3■□□□□ 0.04
Tcof1O08784 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tcof1O08784 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tcof1O08784 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tcof1O08784 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tcof1O08784 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tcof1O08784 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.3■□□□□ 0.04
Tcof1O08784 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tcof1O08784 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tcof1O08784 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tcof1O08784 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms