Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Shisa8J3QNX5 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Gm43703-201ENSMUST00000200523 763 ntBASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.94□□□□□ -0.5
Shisa8J3QNX5 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Shisa8J3QNX5 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.93□□□□□ -0.5
Shisa8J3QNX5 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shisa8J3QNX5 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms