Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Gm12715-201ENSMUST00000121430 1128 ntBASIC15.66■□□□□ 0.1
Ube4aE9Q735 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ube4aE9Q735 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.66■□□□□ 0.1
Ube4aE9Q735 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Gm13097-201ENSMUST00000210722 397 ntBASIC15.66■□□□□ 0.1
Ube4aE9Q735 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.66■□□□□ 0.1
Ube4aE9Q735 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.66■□□□□ 0.1
Ube4aE9Q735 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.66■□□□□ 0.1
Ube4aE9Q735 Gm8862-201ENSMUST00000198379 1346 ntBASIC15.66■□□□□ 0.1
Ube4aE9Q735 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ube4aE9Q735 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube4aE9Q735 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ube4aE9Q735 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.65■□□□□ 0.1
Ube4aE9Q735 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ube4aE9Q735 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube4aE9Q735 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ube4aE9Q735 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube4aE9Q735 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Ube4aE9Q735 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ube4aE9Q735 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC15.65■□□□□ 0.1
Ube4aE9Q735 Gm18615-201ENSMUST00000222919 1031 ntBASIC15.65■□□□□ 0.1
Ube4aE9Q735 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.65■□□□□ 0.1
Ube4aE9Q735 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube4aE9Q735 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ube4aE9Q735 Mir339-201ENSMUST00000083659 96 ntBASIC15.65■□□□□ 0.1
Ube4aE9Q735 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube4aE9Q735 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube4aE9Q735 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube4aE9Q735 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.65■□□□□ 0.1
Ube4aE9Q735 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube4aE9Q735 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube4aE9Q735 Gm10782-202ENSMUST00000223775 1480 ntBASIC15.65■□□□□ 0.1
Ube4aE9Q735 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.65■□□□□ 0.1
Ube4aE9Q735 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ube4aE9Q735 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Gm11930-201ENSMUST00000117788 190 ntBASIC15.64■□□□□ 0.09
Ube4aE9Q735 Gm12997-201ENSMUST00000120207 640 ntBASIC15.64■□□□□ 0.09
Ube4aE9Q735 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Mir3102-201ENSMUST00000175555 104 ntBASIC15.64■□□□□ 0.09
Ube4aE9Q735 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Gm45925-201ENSMUST00000218882 744 ntBASIC15.64■□□□□ 0.09
Ube4aE9Q735 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.64■□□□□ 0.09
Ube4aE9Q735 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC15.64■□□□□ 0.09
Ube4aE9Q735 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ube4aE9Q735 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.63■□□□□ 0.09
Ube4aE9Q735 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ube4aE9Q735 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ube4aE9Q735 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.63■□□□□ 0.09
Ube4aE9Q735 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ube4aE9Q735 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms