Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.98□□□□□ -0.01
Ccdc112A0AUP1 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Gm38223-201ENSMUST00000194484 695 ntBASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc112A0AUP1 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 Syt7-204ENSMUST00000223586 1344 ntBASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 Gm44872-201ENSMUST00000207864 420 ntBASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 Gm7730-201ENSMUST00000212486 454 ntBASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.96□□□□□ -0.01
Ccdc112A0AUP1 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc112A0AUP1 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc112A0AUP1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc112A0AUP1 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc112A0AUP1 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc112A0AUP1 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc112A0AUP1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc112A0AUP1 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc112A0AUP1 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc112A0AUP1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc112A0AUP1 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc112A0AUP1 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.95□□□□□ -0.02
Ccdc112A0AUP1 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc112A0AUP1 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc112A0AUP1 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Ccdc112A0AUP1 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.95□□□□□ -0.02
Ccdc112A0AUP1 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ccdc112A0AUP1 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.95□□□□□ -0.02
Ccdc112A0AUP1 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.95□□□□□ -0.02
Ccdc112A0AUP1 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc112A0AUP1 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc112A0AUP1 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc112A0AUP1 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.95□□□□□ -0.02
Ccdc112A0AUP1 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc112A0AUP1 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.95□□□□□ -0.02
Ccdc112A0AUP1 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc112A0AUP1 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc112A0AUP1 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc112A0AUP1 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms