Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Gm27533-201ENSMUST00000183800 152 ntBASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Gm10766-202ENSMUST00000194123 606 ntBASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 AC151895.1-201ENSMUST00000219025 1742 ntBASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Gm43221-201ENSMUST00000197612 2071 ntBASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Gm44851-201ENSMUST00000205735 2309 ntBASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Mir449b-201ENSMUST00000104833 80 ntBASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Gm27397-201ENSMUST00000184997 107 ntBASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC9.02□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Gm45643-201ENSMUST00000211364 1484 ntBASIC9.02□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Gm44414-201ENSMUST00000203660 2109 ntBASIC9.02□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Trav13-4-dv7A0A075B6C2 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms