Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trim44Q9QXA7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Gm15483-201ENSMUST00000120338 456 ntBASIC15.12■□□□□ 0.01
Trim44Q9QXA7 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Gm18636-201ENSMUST00000218846 1066 ntBASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim44Q9QXA7 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Mir5126-201ENSMUST00000175513 77 ntBASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim44Q9QXA7 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim44Q9QXA7 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim44Q9QXA7 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim44Q9QXA7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim44Q9QXA7 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim44Q9QXA7 Gm37014-201ENSMUST00000194723 2253 ntBASIC15.1■□□□□ 0.01
Trim44Q9QXA7 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.1■□□□□ 0.01
Trim44Q9QXA7 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim44Q9QXA7 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim44Q9QXA7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim44Q9QXA7 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.1■□□□□ 0.01
Trim44Q9QXA7 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim44Q9QXA7 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim44Q9QXA7 Daam2-202ENSMUST00000224595 1926 ntBASIC15.1■□□□□ 0.01
Trim44Q9QXA7 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim44Q9QXA7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim44Q9QXA7 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim44Q9QXA7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim44Q9QXA7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.1■□□□□ 0.01
Trim44Q9QXA7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trim44Q9QXA7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Trim44Q9QXA7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Trim44Q9QXA7 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms