Protein–RNA interactions for Protein: Q9ER42

Barx1, Homeobox protein BarH-like 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Barx1Q9ER42 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Barx1Q9ER42 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.89□□□□□ -0.51
Barx1Q9ER42 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Barx1Q9ER42 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.89□□□□□ -0.51
Barx1Q9ER42 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Barx1Q9ER42 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.89□□□□□ -0.51
Barx1Q9ER42 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Barx1Q9ER42 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Barx1Q9ER42 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Barx1Q9ER42 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Barx1Q9ER42 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Barx1Q9ER42 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.89□□□□□ -0.51
Barx1Q9ER42 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Barx1Q9ER42 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Barx1Q9ER42 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Barx1Q9ER42 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Barx1Q9ER42 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
Barx1Q9ER42 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Barx1Q9ER42 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.88□□□□□ -0.51
Barx1Q9ER42 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.88□□□□□ -0.51
Barx1Q9ER42 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.88□□□□□ -0.51
Barx1Q9ER42 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Gm24548-201ENSMUST00000158650 108 ntBASIC11.88□□□□□ -0.51
Barx1Q9ER42 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.88□□□□□ -0.51
Barx1Q9ER42 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.88□□□□□ -0.51
Barx1Q9ER42 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.88□□□□□ -0.51
Barx1Q9ER42 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.88□□□□□ -0.51
Barx1Q9ER42 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Barx1Q9ER42 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Barx1Q9ER42 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Barx1Q9ER42 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Gm8805-201ENSMUST00000117848 313 ntBASIC11.87□□□□□ -0.51
Barx1Q9ER42 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.87□□□□□ -0.51
Barx1Q9ER42 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Gm3890-201ENSMUST00000182416 207 ntBASIC11.87□□□□□ -0.51
Barx1Q9ER42 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Barx1Q9ER42 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Barx1Q9ER42 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.87□□□□□ -0.51
Barx1Q9ER42 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms