Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Gm42840-201ENSMUST00000200303 2251 ntBASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Gm25043-201ENSMUST00000158604 212 ntBASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Gm5597-201ENSMUST00000182353 1193 ntBASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Gm39404-201ENSMUST00000216350 313 ntBASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Gm13315-201ENSMUST00000120376 991 ntBASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Gm5863-201ENSMUST00000121760 1008 ntBASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Gm8885-201ENSMUST00000189382 598 ntBASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Gm30285-201ENSMUST00000214614 422 ntBASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Gm9176-201ENSMUST00000219955 1120 ntBASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 AC093022.1-201ENSMUST00000226949 1072 ntBASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cpsf1Q9EPU4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Gm2606-201ENSMUST00000100754 1002 ntBASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Gm12058-201ENSMUST00000118614 437 ntBASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Gm25668-201ENSMUST00000157700 129 ntBASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Gm6082-201ENSMUST00000215204 454 ntBASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Gm7293-201ENSMUST00000216682 1007 ntBASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cpsf1Q9EPU4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 Gm12314-201ENSMUST00000118104 538 ntBASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 Gm5904-201ENSMUST00000210286 865 ntBASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 Gm45925-201ENSMUST00000218882 744 ntBASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cpsf1Q9EPU4 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cpsf1Q9EPU4 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms