Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Gm8927-201ENSMUST00000181978 981 ntBASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Gm3222-201ENSMUST00000071282 990 ntBASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hmgn3Q9DCB1 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Gm18057-201ENSMUST00000208220 503 ntBASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 AW822252-206ENSMUST00000208904 237 ntBASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.3□□□□□ -0.44
Hmgn3Q9DCB1 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms