Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Gm44069-201ENSMUST00000204898 506 ntBASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp4bQ9D8B3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Chmp4bQ9D8B3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp4bQ9D8B3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp4bQ9D8B3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp4bQ9D8B3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp4bQ9D8B3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp4bQ9D8B3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC16.52■□□□□ 0.24
Chmp4bQ9D8B3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Chmp4bQ9D8B3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp4bQ9D8B3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp4bQ9D8B3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Chmp4bQ9D8B3 Gm11978-201ENSMUST00000122315 466 ntBASIC16.52■□□□□ 0.24
Chmp4bQ9D8B3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp4bQ9D8B3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.52■□□□□ 0.24
Chmp4bQ9D8B3 Gm8463-201ENSMUST00000208573 613 ntBASIC16.52■□□□□ 0.24
Chmp4bQ9D8B3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp4bQ9D8B3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Chmp4bQ9D8B3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp4bQ9D8B3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Chmp4bQ9D8B3 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Chmp4bQ9D8B3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Chmp4bQ9D8B3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Chmp4bQ9D8B3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp4bQ9D8B3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp4bQ9D8B3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp4bQ9D8B3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Chmp4bQ9D8B3 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp4bQ9D8B3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Gm43677-201ENSMUST00000198098 2378 ntBASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Gm14350-201ENSMUST00000116642 640 ntBASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Gm12091-201ENSMUST00000146791 830 ntBASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Chmp4bQ9D8B3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4bQ9D8B3 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4bQ9D8B3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4bQ9D8B3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4bQ9D8B3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4bQ9D8B3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chmp4bQ9D8B3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Chmp4bQ9D8B3 Gm8798-201ENSMUST00000211877 1661 ntBASIC16.5■□□□□ 0.23
Chmp4bQ9D8B3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms