Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
U2af1Q9D883 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
U2af1Q9D883 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
U2af1Q9D883 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
U2af1Q9D883 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
U2af1Q9D883 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
U2af1Q9D883 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
U2af1Q9D883 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
U2af1Q9D883 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
U2af1Q9D883 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
U2af1Q9D883 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
U2af1Q9D883 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
U2af1Q9D883 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
U2af1Q9D883 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
U2af1Q9D883 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
U2af1Q9D883 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
U2af1Q9D883 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
U2af1Q9D883 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
U2af1Q9D883 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
U2af1Q9D883 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
U2af1Q9D883 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
U2af1Q9D883 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
U2af1Q9D883 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
U2af1Q9D883 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
U2af1Q9D883 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC17.23■□□□□ 0.35
U2af1Q9D883 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC17.23■□□□□ 0.35
U2af1Q9D883 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC17.23■□□□□ 0.35
U2af1Q9D883 Gm19163-201ENSMUST00000223313 780 ntBASIC17.23■□□□□ 0.35
U2af1Q9D883 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
U2af1Q9D883 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
U2af1Q9D883 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
U2af1Q9D883 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC17.23■□□□□ 0.35
U2af1Q9D883 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
U2af1Q9D883 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
U2af1Q9D883 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
U2af1Q9D883 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
U2af1Q9D883 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
U2af1Q9D883 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
U2af1Q9D883 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
U2af1Q9D883 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
U2af1Q9D883 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
U2af1Q9D883 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
U2af1Q9D883 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
U2af1Q9D883 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
U2af1Q9D883 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
U2af1Q9D883 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC17.22■□□□□ 0.35
U2af1Q9D883 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC17.22■□□□□ 0.35
U2af1Q9D883 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC17.22■□□□□ 0.35
U2af1Q9D883 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
U2af1Q9D883 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
U2af1Q9D883 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC17.22■□□□□ 0.35
U2af1Q9D883 Gm9899-201ENSMUST00000065519 555 ntBASIC17.22■□□□□ 0.35
U2af1Q9D883 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
U2af1Q9D883 Snora73a-201ENSMUST00000082453 205 ntBASIC17.22■□□□□ 0.35
U2af1Q9D883 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
U2af1Q9D883 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
U2af1Q9D883 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
U2af1Q9D883 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
U2af1Q9D883 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
U2af1Q9D883 Gm44401-201ENSMUST00000204462 2375 ntBASIC17.22■□□□□ 0.35
U2af1Q9D883 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
U2af1Q9D883 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
U2af1Q9D883 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
U2af1Q9D883 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
U2af1Q9D883 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2af1Q9D883 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2af1Q9D883 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
U2af1Q9D883 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
U2af1Q9D883 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
U2af1Q9D883 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2af1Q9D883 Gm17420-201ENSMUST00000164753 153 ntBASIC17.21■□□□□ 0.35
U2af1Q9D883 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC17.21■□□□□ 0.35
U2af1Q9D883 Gm25927-201ENSMUST00000175058 117 ntBASIC17.21■□□□□ 0.35
U2af1Q9D883 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC17.21■□□□□ 0.35
U2af1Q9D883 n-R5s77-201ENSMUST00000083757 119 ntBASIC17.21■□□□□ 0.35
U2af1Q9D883 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2af1Q9D883 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2af1Q9D883 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
U2af1Q9D883 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
U2af1Q9D883 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC17.21■□□□□ 0.34
U2af1Q9D883 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
U2af1Q9D883 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2af1Q9D883 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2af1Q9D883 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
U2af1Q9D883 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2af1Q9D883 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2af1Q9D883 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
U2af1Q9D883 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2af1Q9D883 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
U2af1Q9D883 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
U2af1Q9D883 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2af1Q9D883 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
U2af1Q9D883 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
U2af1Q9D883 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
U2af1Q9D883 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
U2af1Q9D883 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
U2af1Q9D883 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
U2af1Q9D883 Gm17208-201ENSMUST00000168388 535 ntBASIC17.2■□□□□ 0.34
U2af1Q9D883 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
U2af1Q9D883 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms