Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rtl8cQ9D6I0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rtl8cQ9D6I0 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rtl8cQ9D6I0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rtl8cQ9D6I0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rtl8cQ9D6I0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rtl8cQ9D6I0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rtl8cQ9D6I0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rtl8cQ9D6I0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Rtl8cQ9D6I0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.76□□□□□ -0.53
Rtl8cQ9D6I0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rtl8cQ9D6I0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rtl8cQ9D6I0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.76□□□□□ -0.53
Rtl8cQ9D6I0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rtl8cQ9D6I0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rtl8cQ9D6I0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rtl8cQ9D6I0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Gm13689-201ENSMUST00000119360 685 ntBASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rtl8cQ9D6I0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rtl8cQ9D6I0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms