Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim42Q9D2H5 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Gm24420-201ENSMUST00000176676 59 ntBASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Gm4804-201ENSMUST00000182234 999 ntBASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Dupd1-202ENSMUST00000224735 548 ntBASIC13.15□□□□□ -0.3
Trim42Q9D2H5 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim42Q9D2H5 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Gm13015-201ENSMUST00000118674 204 ntBASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Gm13385-201ENSMUST00000121089 220 ntBASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Gm45841-201ENSMUST00000207700 164 ntBASIC13.14□□□□□ -0.31
Trim42Q9D2H5 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Gm5425-201ENSMUST00000214125 459 ntBASIC13.14□□□□□ -0.31
Trim42Q9D2H5 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.14□□□□□ -0.31
Trim42Q9D2H5 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.14□□□□□ -0.31
Trim42Q9D2H5 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Trim42Q9D2H5 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms