Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 AC159196.2-201ENSMUST00000224082 1622 ntBASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Gm6443-201ENSMUST00000203599 874 ntBASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Gm18032-201ENSMUST00000222541 538 ntBASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 AC121598.1-201ENSMUST00000228224 1019 ntBASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Gm8798-201ENSMUST00000211877 1661 ntBASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Chchd1Q9CQA6 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Mir698-201ENSMUST00000102164 109 ntBASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Gm27390-201ENSMUST00000184516 176 ntBASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Gm35960-201ENSMUST00000202712 767 ntBASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Gm43935-201ENSMUST00000203569 1050 ntBASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Gm18027-201ENSMUST00000218947 619 ntBASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 AC121577.1-201ENSMUST00000227302 707 ntBASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Gm3928-201ENSMUST00000121141 1307 ntBASIC9.82□□□□□ -0.84
Chchd1Q9CQA6 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Gm44831-201ENSMUST00000208469 2989 ntBASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Gm2238-201ENSMUST00000192074 3669 ntBASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Chchd1Q9CQA6 Olfr129-201ENSMUST00000122318 993 ntBASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms