Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh23Q99PF4 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh23Q99PF4 Gm37133-201ENSMUST00000192705 1922 ntBASIC13□□□□□ -0.33
Cdh23Q99PF4 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdh23Q99PF4 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh23Q99PF4 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13□□□□□ -0.33
Cdh23Q99PF4 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh23Q99PF4 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh23Q99PF4 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13□□□□□ -0.33
Cdh23Q99PF4 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh23Q99PF4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13□□□□□ -0.33
Cdh23Q99PF4 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13□□□□□ -0.33
Cdh23Q99PF4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh23Q99PF4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh23Q99PF4 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh23Q99PF4 Il17rd-203ENSMUST00000225146 3366 ntBASIC13□□□□□ -0.33
Cdh23Q99PF4 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh23Q99PF4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh23Q99PF4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh23Q99PF4 Gm13384-201ENSMUST00000117166 1344 ntBASIC13□□□□□ -0.33
Cdh23Q99PF4 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13□□□□□ -0.33
Cdh23Q99PF4 Gm13809-201ENSMUST00000117921 597 ntBASIC13□□□□□ -0.33
Cdh23Q99PF4 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdh23Q99PF4 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cdh23Q99PF4 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh23Q99PF4 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh23Q99PF4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh23Q99PF4 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh23Q99PF4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh23Q99PF4 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh23Q99PF4 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh23Q99PF4 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdh23Q99PF4 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13□□□□□ -0.33
Cdh23Q99PF4 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13□□□□□ -0.33
Cdh23Q99PF4 Gm42657-201ENSMUST00000201746 211 ntBASIC13□□□□□ -0.33
Cdh23Q99PF4 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13□□□□□ -0.33
Cdh23Q99PF4 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Gm12990-201ENSMUST00000120372 468 ntBASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Gm14999-201ENSMUST00000121039 624 ntBASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Gm17827-201ENSMUST00000211825 742 ntBASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.99□□□□□ -0.33
Cdh23Q99PF4 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Gm45120-201ENSMUST00000208880 408 ntBASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdh23Q99PF4 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Gm5621-201ENSMUST00000187303 640 ntBASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Gm45398-201ENSMUST00000210561 165 ntBASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdh23Q99PF4 Gm14274-201ENSMUST00000117182 615 ntBASIC12.98□□□□□ -0.33
Cdh23Q99PF4 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms