Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm6222-202ENSMUST00000182143 629 ntBASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Gm44364-201ENSMUST00000198368 141 ntBASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Gm4768-201ENSMUST00000206199 686 ntBASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Gm6458-201ENSMUST00000211573 635 ntBASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b1Q99NB9 Gm13342-201ENSMUST00000121055 207 ntBASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Gm11978-201ENSMUST00000122315 466 ntBASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Gm9368-201ENSMUST00000219348 831 ntBASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b1Q99NB9 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Sf3b1Q99NB9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.9□□□□□ -0.19
Sf3b1Q99NB9 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sf3b1Q99NB9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Sf3b1Q99NB9 Gm12241-201ENSMUST00000118330 726 ntBASIC13.9□□□□□ -0.19
Sf3b1Q99NB9 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.9□□□□□ -0.19
Sf3b1Q99NB9 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.9□□□□□ -0.19
Sf3b1Q99NB9 Gm12363-201ENSMUST00000122250 668 ntBASIC13.9□□□□□ -0.19
Sf3b1Q99NB9 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Sf3b1Q99NB9 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.9□□□□□ -0.19
Sf3b1Q99NB9 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.9□□□□□ -0.19
Sf3b1Q99NB9 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.9□□□□□ -0.19
Sf3b1Q99NB9 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.9□□□□□ -0.19
Sf3b1Q99NB9 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.9□□□□□ -0.19
Sf3b1Q99NB9 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.9□□□□□ -0.19
Sf3b1Q99NB9 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.9□□□□□ -0.19
Sf3b1Q99NB9 Gm18041-201ENSMUST00000218210 618 ntBASIC13.9□□□□□ -0.19
Sf3b1Q99NB9 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sf3b1Q99NB9 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Sf3b1Q99NB9 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Sf3b1Q99NB9 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b1Q99NB9 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms