Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Auts2-212ENSMUST00000178555 309 ntBASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Gm10576-201ENSMUST00000191927 825 ntBASIC12.71□□□□□ -0.37
Cstf3Q99LI7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cstf3Q99LI7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cstf3Q99LI7 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cstf3Q99LI7 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.71□□□□□ -0.38
Cstf3Q99LI7 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cstf3Q99LI7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cstf3Q99LI7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Gm15371-201ENSMUST00000117057 784 ntBASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.69□□□□□ -0.38
Cstf3Q99LI7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Gm26315-201ENSMUST00000083890 321 ntBASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms