Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Gm4984-201ENSMUST00000115987 360 ntBASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Gm11637-201ENSMUST00000120601 592 ntBASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Gm4271-201ENSMUST00000174444 973 ntBASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdha9Q91Y11 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Gm29127-201ENSMUST00000188304 517 ntBASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.93□□□□□ -0.18
Pcdha9Q91Y11 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Gm12390-201ENSMUST00000117897 397 ntBASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Gm18187-201ENSMUST00000196476 984 ntBASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdha9Q91Y11 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms