Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.59□□□□□ -0.23
Trim60Q8VI40 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Trim60Q8VI40 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim60Q8VI40 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim60Q8VI40 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Trim60Q8VI40 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trim60Q8VI40 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.58□□□□□ -0.23
Trim60Q8VI40 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Trim60Q8VI40 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.58□□□□□ -0.23
Trim60Q8VI40 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.58□□□□□ -0.24
Trim60Q8VI40 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.58□□□□□ -0.24
Trim60Q8VI40 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.58□□□□□ -0.24
Trim60Q8VI40 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.58□□□□□ -0.24
Trim60Q8VI40 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Gm42550-201ENSMUST00000201553 960 ntBASIC13.58□□□□□ -0.24
Trim60Q8VI40 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim60Q8VI40 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.58□□□□□ -0.24
Trim60Q8VI40 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Trim60Q8VI40 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim60Q8VI40 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.58□□□□□ -0.24
Trim60Q8VI40 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim60Q8VI40 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Mir8102-201ENSMUST00000184148 139 ntBASIC13.57□□□□□ -0.24
Trim60Q8VI40 Gm27989-201ENSMUST00000184721 107 ntBASIC13.57□□□□□ -0.24
Trim60Q8VI40 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Gm29608-201ENSMUST00000190444 463 ntBASIC13.57□□□□□ -0.24
Trim60Q8VI40 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim60Q8VI40 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim60Q8VI40 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms