Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps4aQ8VEJ9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps4aQ8VEJ9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps4aQ8VEJ9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vps4aQ8VEJ9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps4aQ8VEJ9 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps4aQ8VEJ9 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.77□□□□□ -0.36
Vps4aQ8VEJ9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Vps4aQ8VEJ9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Vps4aQ8VEJ9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Gm27839-201ENSMUST00000184242 106 ntBASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps4aQ8VEJ9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms