Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Mir449b-201ENSMUST00000104833 80 ntBASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Gm25144-201ENSMUST00000179561 110 ntBASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Gm25352-201ENSMUST00000179815 110 ntBASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Gm3436-201ENSMUST00000179930 840 ntBASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nudcd3Q8R1N4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Gm12403-201ENSMUST00000121384 959 ntBASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd3Q8R1N4 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd3Q8R1N4 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd3Q8R1N4 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd3Q8R1N4 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd3Q8R1N4 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.09□□□□□ -0.31
Nudcd3Q8R1N4 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Nudcd3Q8R1N4 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd3Q8R1N4 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms