Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc28bQ8CEG5 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Gm28630-201ENSMUST00000187806 498 ntBASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Gm44124-201ENSMUST00000204159 472 ntBASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Gm18206-201ENSMUST00000207027 926 ntBASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Shd-206ENSMUST00000225145 998 ntBASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc28bQ8CEG5 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Gm25911-201ENSMUST00000157621 56 ntBASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Gm24158-201ENSMUST00000175263 71 ntBASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc28bQ8CEG5 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms