Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Gm42612-201ENSMUST00000197986 623 ntBASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Gm43170-201ENSMUST00000199827 612 ntBASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Gm6180-201ENSMUST00000065243 498 ntBASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.12□□□□□ -0.15
Vcpip1Q8CDG3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vcpip1Q8CDG3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.1□□□□□ -0.15
Vcpip1Q8CDG3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vcpip1Q8CDG3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms