Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Usp44Q8C2S0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Usp44Q8C2S0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Usp44Q8C2S0 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.33■□□□□ 0.05
Usp44Q8C2S0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Usp44Q8C2S0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Gm12291-201ENSMUST00000121627 311 ntBASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Usp44Q8C2S0 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Gm6266-201ENSMUST00000203844 806 ntBASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Usp44Q8C2S0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Gm22121-201ENSMUST00000175148 54 ntBASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Gm26927-201ENSMUST00000182385 965 ntBASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Gm37042-201ENSMUST00000193816 581 ntBASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms