Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Gm18584-201ENSMUST00000203098 964 ntBASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Gm7783-201ENSMUST00000204795 781 ntBASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sh3rf2Q8BZT2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Gm15370-201ENSMUST00000117158 253 ntBASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Gm43758-201ENSMUST00000199500 367 ntBASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sh3rf2Q8BZT2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sh3rf2Q8BZT2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.27□□□□□ -0.28
Sh3rf2Q8BZT2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sh3rf2Q8BZT2 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sh3rf2Q8BZT2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sh3rf2Q8BZT2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sh3rf2Q8BZT2 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.27□□□□□ -0.28
Sh3rf2Q8BZT2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
Sh3rf2Q8BZT2 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sh3rf2Q8BZT2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sh3rf2Q8BZT2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sh3rf2Q8BZT2 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Mir7221-201ENSMUST00000184009 72 ntBASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Gm45865-201ENSMUST00000211815 945 ntBASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Gm5781-201ENSMUST00000219792 443 ntBASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Gm8227-201ENSMUST00000223306 571 ntBASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Acot6-202ENSMUST00000222921 3622 ntBASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf2Q8BZT2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.26□□□□□ -0.29
Sh3rf2Q8BZT2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms