Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm9025-201ENSMUST00000122415 1575 ntBASIC17.91■□□□□ 0.46
Usp40Q8BWR4 Gm6015-201ENSMUST00000217493 1586 ntBASIC17.91■□□□□ 0.46
Usp40Q8BWR4 AC113060.1-201ENSMUST00000225689 1573 ntBASIC17.91■□□□□ 0.46
Usp40Q8BWR4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC17.91■□□□□ 0.46
Usp40Q8BWR4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp40Q8BWR4 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 AC122314.1-201ENSMUST00000223056 2239 ntBASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Gm37827-201ENSMUST00000194486 1542 ntBASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Gm9004-201ENSMUST00000218739 1222 ntBASIC17.9■□□□□ 0.46
Usp40Q8BWR4 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Gm22058-201ENSMUST00000083393 310 ntBASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Usp40Q8BWR4 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.46
Usp40Q8BWR4 Gm45242-201ENSMUST00000210666 2129 ntBASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Gm5904-201ENSMUST00000210286 865 ntBASIC17.89■□□□□ 0.45
Usp40Q8BWR4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Gm15459-201ENSMUST00000117405 1941 ntBASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Gm8355-201ENSMUST00000177767 1941 ntBASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Gm3287-205ENSMUST00000228893 1332 ntBASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Usp40Q8BWR4 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Gm26956-201ENSMUST00000182176 986 ntBASIC17.88■□□□□ 0.45
Usp40Q8BWR4 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Gm7789-202ENSMUST00000211273 1400 ntBASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp40Q8BWR4 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms