Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Usp43Q8BUM9 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Gm8213-201ENSMUST00000118191 441 ntBASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Gm9002-201ENSMUST00000178437 499 ntBASIC13.28□□□□□ -0.28
Usp43Q8BUM9 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Gm10012-201ENSMUST00000078252 192 ntBASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp43Q8BUM9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usp43Q8BUM9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usp43Q8BUM9 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usp43Q8BUM9 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Usp43Q8BUM9 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usp43Q8BUM9 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usp43Q8BUM9 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usp43Q8BUM9 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Usp43Q8BUM9 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usp43Q8BUM9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Usp43Q8BUM9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usp43Q8BUM9 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usp43Q8BUM9 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Mir686-201ENSMUST00000102174 109 ntBASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Gm11618-201ENSMUST00000117946 267 ntBASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Gm15806-201ENSMUST00000120696 955 ntBASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Mir1894-201ENSMUST00000122802 81 ntBASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Gm27892-201ENSMUST00000185017 106 ntBASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Gm17794-201ENSMUST00000220252 955 ntBASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Gm5356-201ENSMUST00000093326 615 ntBASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp43Q8BUM9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms