Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Gm14719-201ENSMUST00000121891 340 ntBASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.7□□□□□ -0.38
Cpne3Q8BT60 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpne3Q8BT60 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Gm11524-201ENSMUST00000119349 807 ntBASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Gm24694-201ENSMUST00000180054 110 ntBASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Gm27663-201ENSMUST00000184839 110 ntBASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Gm29608-201ENSMUST00000190444 463 ntBASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Gm45841-201ENSMUST00000207700 164 ntBASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Gm24447-201ENSMUST00000083977 338 ntBASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpne3Q8BT60 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Gm15376-201ENSMUST00000122258 783 ntBASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Gm19078-201ENSMUST00000206311 727 ntBASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpne3Q8BT60 Syt7-205ENSMUST00000224135 1557 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms